Upload results --

Received from Rafael A. Irizarry at 1033 on 030424:

• dilution.csv: 12037667 bytes

• hgu95.csv: 3474261 bytes

• hgu133.csv: 16087767 bytes

Method: MAS 5.0 / MAS 5.0

URL: http://www.affymetrix.com/support/technical/technotes/statistical_algorithms_technote.pdf

Assessment results --

• Comparison report based on HGU95 SPIKE-IN and DILUTION studies [pdf]

• Simple assessment based on HGU95 SPIKE-IN and DILUTION studies [pdf]

• Complete assessment based on HGU95 SPIKE-IN data [pdf]

• Complete assessment based on HGU133 SPIKE-IN data [pdf]

• Results (with table1 score coordinate):
  1. [1] 0.2920239
  2. [2] 0.8890008
  3. [3] 0.7297434
  4. [ ] 1226
  5. [ ] 332
  6. [4] 0.8474941
  7. [5] 0.7058227
  8. [6] 0.8565416
  9. [ ] 0.2171241
  10. [ ] 0.2379589
  11. [ ] 0.2696288
  12. [7] 0.3557402
  13. [8] 3107.387
  14. [9] 12.81893
  15. [10] 2.655135
  16. [11] 0.6932507
  17. [12] 0.6471881
  18. [ ] 0.06160714
  19. [ ] 0.06190476
  20. [ ] 0.0623283
  21. [13] 0.06508575
  22. [14] 3069.786
  23. [15] 3.714286
  24. [ ] 12626
  25. [ ] 12625

• Results2 (with table2 score coordinate):
  1. [5] 0.7058227
  2. [4] 0.8565416
  3. [ ] 0.2171241
  4. [ ] 0.2379589
  5. [ ] 0.2696288
  6. [ ] 0.3557402
  7. [ ] 3107.387
  8. [ ] 12.81893
  9. [ ] 2.655135
  10. [9] 0.6932507
  11. [10] 0.6471881
  12. [ ] 0.06160714
  13. [ ] 0.06190476
  14. [ ] 0.0623283
  15. [ ] 0.06508575
  16. [ ] 3069.786
  17. [ ] 3.714286
  18. [2] 0.8510266
  19. [ ] 3.368498
  20. [3] 4.478496
  21. [11] 0.003248762
  22. [12] 0
  23. [13] 0
  24. [14] 0.002436572
  25. [ ] 0.3820233
  26. [1] 0.626407
  27. [ ] 0.9418987
  28. [ ] 1.532021
  29. [6] 0.6897503
  30. [7] 0.811161
  31. [8] 0.4504478
  32. [ ] 0.2690764
  33. [ ] 0.4168783
  34. [ ] 0.3831881
  35. [ ] 1.061453
  36. [ ] 0.8993434
  37. [ ] 0.5449454
  38. [ ] 0.6732303
  39. [ ] 0.7754331
  40. [ ] 0.8158668
  41. [ ] 0.800411
  42. [ ] 0.8207885
  43. [ ] 0.7541558
  44. [ ] 0.6509071
  45. [ ] 0.5708526
  46. [ ] 0.3071781
  47. [ ] 0.284286
  48. [ ] 12626

• Results2-133 (with table2 score coordinate):
  1. [5] 0.7668816
  2. [4] 0.9061632
  3. [ ] 0.1873404
  4. [ ] 0.2136005
  5. [ ] 0.2593798
  6. [ ] 0.3860341
  7. [ ] 2863.502
  8. [ ] 35.44689
  9. [ ] 2.66273
  10. [9] 0.7655348
  11. [10] 0.6419548
  12. [ ] 0.06528723
  13. [ ] 0.0670935
  14. [ ] 0.06903952
  15. [ ] 0.07389428
  16. [ ] 2785
  17. [ ] 14.33333
  18. [2] 0.4674632
  19. [ ] 2.826933
  20. [3] 4.013785
  21. [11] 0.00375609
  22. [12] 0
  23. [13] 0
  24. [14] 0.002817067
  25. [ ] 0.1524604
  26. [1] 0.2912704
  27. [ ] 0.6360222
  28. [ ] 1.364532
  29. [6] 0.6488933
  30. [7] 0.7137
  31. [8] 0.7664672
  32. [ ] 0.3580726
  33. [ ] 0.5414254
  34. [ ] 0.7263216
  35. [ ] 0.4470989
  36. [ ] 0.4264973
  37. [ ] 0.5542004
  38. [ ] 0.7576666
  39. [ ] 0.8501689
  40. [ ] 0.8139135
  41. [ ] 0.7025572
  42. [ ] 0.627562
  43. [ ] 0.8396937
  44. [ ] 0.909196
  45. [ ] 1.018938
  46. [ ] 0.7930916
  47. [ ] 0.4784973
  48. [ ] 22155

• Log of assessment R-script [txt]